Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.94□□□□□ -0.34
Rnf38Q8BI21 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf38Q8BI21 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf38Q8BI21 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Gm15240-201ENSMUST00000118156 720 ntBASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Gm4804-201ENSMUST00000182234 999 ntBASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf38Q8BI21 Gm17837-201ENSMUST00000186435 985 ntBASIC12.92□□□□□ -0.34
Rnf38Q8BI21 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms