Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Atg4dQ8BGV9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Atg4dQ8BGV9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Gm16372-201ENSMUST00000073088 450 ntBASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Atg4dQ8BGV9 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Gm27486-201ENSMUST00000184923 80 ntBASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Atg4dQ8BGV9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms