Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Gm24543-201ENSMUST00000103867 82 ntBASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Gm13323-201ENSMUST00000120245 1151 ntBASIC14.22□□□□□ -0.13
Trim6Q8BGE7 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.22□□□□□ -0.13
Trim6Q8BGE7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Gm24158-201ENSMUST00000175263 71 ntBASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim6Q8BGE7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim6Q8BGE7 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim6Q8BGE7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim6Q8BGE7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim6Q8BGE7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim6Q8BGE7 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim6Q8BGE7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm22065-201ENSMUST00000103753 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm22066-201ENSMUST00000103761 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm24932-201ENSMUST00000103763 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm24115-201ENSMUST00000103799 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm22190-201ENSMUST00000103827 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm22191-201ENSMUST00000103831 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm24721-201ENSMUST00000103849 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm28018-201ENSMUST00000103869 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm26399-201ENSMUST00000103937 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm25349-201ENSMUST00000177728 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm23616-201ENSMUST00000177797 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm25871-201ENSMUST00000177816 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm24752-201ENSMUST00000178240 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm24496-201ENSMUST00000178287 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm25649-201ENSMUST00000178476 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm25548-201ENSMUST00000178681 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm23147-201ENSMUST00000178841 110 ntBASIC14.2□□□□□ -0.14
Trim6Q8BGE7 Gm26095-201ENSMUST00000179270 110 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms