Protein–RNA interactions for Protein: Q80U56

Avl9, Late secretory pathway protein AVL9 homolog, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Avl9Q80U56 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.94□□□□□ -0.34
Avl9Q80U56 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.94□□□□□ -0.34
Avl9Q80U56 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.94□□□□□ -0.34
Avl9Q80U56 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Snora78-201ENSMUST00000158630 128 ntBASIC12.94□□□□□ -0.34
Avl9Q80U56 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.94□□□□□ -0.34
Avl9Q80U56 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.94□□□□□ -0.34
Avl9Q80U56 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Avl9Q80U56 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Avl9Q80U56 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Gm13226-201ENSMUST00000117838 404 ntBASIC12.93□□□□□ -0.34
Avl9Q80U56 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.93□□□□□ -0.34
Avl9Q80U56 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Gm29127-201ENSMUST00000188304 517 ntBASIC12.93□□□□□ -0.34
Avl9Q80U56 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.93□□□□□ -0.34
Avl9Q80U56 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.93□□□□□ -0.34
Avl9Q80U56 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.93□□□□□ -0.34
Avl9Q80U56 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.93□□□□□ -0.34
Avl9Q80U56 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Avl9Q80U56 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Avl9Q80U56 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Avl9Q80U56 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Avl9Q80U56 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Avl9Q80U56 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Avl9Q80U56 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms