Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Gm21470-201ENSMUST00000187680 696 ntBASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Gm43118-201ENSMUST00000199149 775 ntBASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Gm5363-201ENSMUST00000211927 938 ntBASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Gm45930-201ENSMUST00000221330 292 ntBASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm13612-201ENSMUST00000119276 390 ntBASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm27516-201ENSMUST00000184237 98 ntBASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm28196-201ENSMUST00000187719 640 ntBASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm38341-201ENSMUST00000195357 515 ntBASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf38bQ80SY5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.02□□□□□ -0.16
Prpf38bQ80SY5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Gm9823-201ENSMUST00000051212 327 ntBASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf38bQ80SY5 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms