Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdh8Q7TSK3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.21□□□□□ -0.3
Pcdh8Q7TSK3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Gm24644-201ENSMUST00000157114 139 ntBASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Gm38144-201ENSMUST00000192790 465 ntBASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Itm2b-204ENSMUST00000228637 783 ntBASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Grk6-205ENSMUST00000224653 2976 ntBASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdh8Q7TSK3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Gm22331-201ENSMUST00000158066 136 ntBASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Gm24196-201ENSMUST00000179161 110 ntBASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdh8Q7TSK3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Gm14660-201ENSMUST00000119809 575 ntBASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Snora78-201ENSMUST00000158630 128 ntBASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdh8Q7TSK3 Gm29127-201ENSMUST00000188304 517 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms