Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm22121-201ENSMUST00000175148 54 ntBASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Gm44967-201ENSMUST00000207047 631 ntBASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Gm18212-201ENSMUST00000211678 889 ntBASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx55Q6ZPL9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 B9d1os-201ENSMUST00000137010 674 ntBASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Gm22902-201ENSMUST00000158488 302 ntBASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Gm5950-201ENSMUST00000213337 772 ntBASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx55Q6ZPL9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm14028-201ENSMUST00000117434 479 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm13570-201ENSMUST00000140763 309 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm15276-201ENSMUST00000145953 498 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 AA914427-201ENSMUST00000193194 1166 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx55Q6ZPL9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.11■□□□□ 0.01
Ddx55Q6ZPL9 Gm37986-201ENSMUST00000193285 383 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms