Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11.27□□□□□ -0.61
Rif1Q6PR54 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.27□□□□□ -0.61
Rif1Q6PR54 Gm16372-201ENSMUST00000073088 450 ntBASIC11.27□□□□□ -0.61
Rif1Q6PR54 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rif1Q6PR54 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rif1Q6PR54 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rif1Q6PR54 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.27□□□□□ -0.61
Rif1Q6PR54 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rif1Q6PR54 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rif1Q6PR54 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rif1Q6PR54 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Gm19163-201ENSMUST00000223313 780 ntBASIC11.26□□□□□ -0.61
Rif1Q6PR54 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.26□□□□□ -0.61
Rif1Q6PR54 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.26□□□□□ -0.61
Rif1Q6PR54 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.26□□□□□ -0.61
Rif1Q6PR54 Gm10076-201ENSMUST00000073238 384 ntBASIC11.26□□□□□ -0.61
Rif1Q6PR54 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rif1Q6PR54 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.25□□□□□ -0.61
Rif1Q6PR54 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm11450-201ENSMUST00000121144 333 ntBASIC11.25□□□□□ -0.61
Rif1Q6PR54 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.25□□□□□ -0.61
Rif1Q6PR54 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm25201-201ENSMUST00000083093 170 ntBASIC11.25□□□□□ -0.61
Rif1Q6PR54 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.25□□□□□ -0.61
Rif1Q6PR54 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.25□□□□□ -0.61
Rif1Q6PR54 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.25□□□□□ -0.61
Rif1Q6PR54 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms