Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rad54bQ6PFE3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm13223-201ENSMUST00000118609 747 ntBASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm26308-201ENSMUST00000157768 69 ntBASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm6736-201ENSMUST00000166583 948 ntBASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm5867-201ENSMUST00000063197 592 ntBASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.48□□□□□ -0.25
Rad54bQ6PFE3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Gm17837-201ENSMUST00000186435 985 ntBASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Gm38144-201ENSMUST00000192790 465 ntBASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Gm19931-201ENSMUST00000198920 368 ntBASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rad54bQ6PFE3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms