Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12616-201ENSMUST00000118594 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm20426-201ENSMUST00000173657 440 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12624-201ENSMUST00000177615 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12621-201ENSMUST00000177760 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12615-201ENSMUST00000177970 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12622-201ENSMUST00000177975 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12627-201ENSMUST00000178412 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12625-201ENSMUST00000179122 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12614-201ENSMUST00000179586 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12613-201ENSMUST00000180323 382 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm44967-201ENSMUST00000207047 631 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm45118-201ENSMUST00000208928 825 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm16372-201ENSMUST00000073088 450 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ccdc85bQ6PDY0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Gm3890-201ENSMUST00000182416 207 ntBASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.92□□□□□ -0.18
Ccdc85bQ6PDY0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Gm7857-201ENSMUST00000117957 358 ntBASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Gm13123-201ENSMUST00000122173 492 ntBASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.91□□□□□ -0.18
Ccdc85bQ6PDY0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms