Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Gm7461-201ENSMUST00000058918 827 ntBASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rnf220Q6PDX6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Gm15483-201ENSMUST00000120338 456 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Mzt1-203ENSMUST00000227948 952 ntBASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rnf220Q6PDX6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Rpph1-201ENSMUST00000175096 319 ntBASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rnf220Q6PDX6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Rnf220Q6PDX6 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms