Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Gm8584-201ENSMUST00000171982 758 ntBASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Gm44397-201ENSMUST00000195950 113 ntBASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hmgb4Q6P8W9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hmgb4Q6P8W9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Gm13612-201ENSMUST00000119276 390 ntBASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hmgb4Q6P8W9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms