Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.56□□□□□ -0.24
Casc4Q6P2L7 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Gm5161-201ENSMUST00000075243 853 ntBASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Gm24447-201ENSMUST00000083977 338 ntBASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Casc4Q6P2L7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Mir7654-201ENSMUST00000185082 70 ntBASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Gm9908-201ENSMUST00000211534 448 ntBASIC13.55□□□□□ -0.24
Casc4Q6P2L7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Casc4Q6P2L7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Gm15371-201ENSMUST00000117057 784 ntBASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Gm17330-201ENSMUST00000221047 165 ntBASIC13.54□□□□□ -0.24
Casc4Q6P2L7 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Casc4Q6P2L7 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms