Protein–RNA interactions for Protein: Q6A0D4

Rftn1, Raftlin, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn1Q6A0D4 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rftn1Q6A0D4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gm7809-201ENSMUST00000153199 742 ntBASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gm21769-201ENSMUST00000211922 111 ntBASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.61□□□□□ -0.23
Rftn1Q6A0D4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Gm11637-201ENSMUST00000120601 592 ntBASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Gm17376-201ENSMUST00000166016 84 ntBASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Gm6082-201ENSMUST00000215204 454 ntBASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Rftn1Q6A0D4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rftn1Q6A0D4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms