Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.82■□□□□ 0.12
Col11a2Q64739 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.82■□□□□ 0.12
Col11a2Q64739 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col11a2Q64739 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a2Q64739 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a2Q64739 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a2Q64739 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Col11a2Q64739 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a2Q64739 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col11a2Q64739 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.81■□□□□ 0.12
Col11a2Q64739 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.81■□□□□ 0.12
Col11a2Q64739 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Col11a2Q64739 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col11a2Q64739 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.8■□□□□ 0.12
Col11a2Q64739 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.8■□□□□ 0.12
Col11a2Q64739 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.8■□□□□ 0.12
Col11a2Q64739 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm7600-201ENSMUST00000209657 785 ntBASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC15.8■□□□□ 0.12
Col11a2Q64739 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col11a2Q64739 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col11a2Q64739 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.79■□□□□ 0.12
Col11a2Q64739 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Col11a2Q64739 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.79■□□□□ 0.12
Col11a2Q64739 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.79■□□□□ 0.12
Col11a2Q64739 Gm15432-201ENSMUST00000121106 195 ntBASIC15.79■□□□□ 0.12
Col11a2Q64739 Gm14665-201ENSMUST00000122294 557 ntBASIC15.79■□□□□ 0.12
Col11a2Q64739 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.79■□□□□ 0.12
Col11a2Q64739 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Gm43916-201ENSMUST00000205062 967 ntBASIC15.79■□□□□ 0.12
Col11a2Q64739 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col11a2Q64739 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col11a2Q64739 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.79■□□□□ 0.12
Col11a2Q64739 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms