Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.24□□□□□ -0.61
SspnQ62147 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SspnQ62147 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Gm12585-201ENSMUST00000117307 290 ntBASIC11.24□□□□□ -0.61
SspnQ62147 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
SspnQ62147 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.24□□□□□ -0.61
SspnQ62147 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.24□□□□□ -0.61
SspnQ62147 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.24□□□□□ -0.61
SspnQ62147 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.24□□□□□ -0.61
SspnQ62147 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.24□□□□□ -0.61
SspnQ62147 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SspnQ62147 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SspnQ62147 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.24□□□□□ -0.61
SspnQ62147 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SspnQ62147 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SspnQ62147 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SspnQ62147 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.23□□□□□ -0.61
SspnQ62147 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SspnQ62147 Gm13453-201ENSMUST00000118708 357 ntBASIC11.23□□□□□ -0.61
SspnQ62147 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.23□□□□□ -0.61
SspnQ62147 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SspnQ62147 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.23□□□□□ -0.61
SspnQ62147 Gm5425-201ENSMUST00000214125 459 ntBASIC11.23□□□□□ -0.61
SspnQ62147 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.23□□□□□ -0.61
SspnQ62147 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
SspnQ62147 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SspnQ62147 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SspnQ62147 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SspnQ62147 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.23□□□□□ -0.61
SspnQ62147 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SspnQ62147 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
SspnQ62147 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
SspnQ62147 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SspnQ62147 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SspnQ62147 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.22□□□□□ -0.61
SspnQ62147 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.22□□□□□ -0.61
SspnQ62147 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.22□□□□□ -0.61
SspnQ62147 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SspnQ62147 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
SspnQ62147 Gm27680-201ENSMUST00000184192 160 ntBASIC11.22□□□□□ -0.61
SspnQ62147 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.22□□□□□ -0.61
SspnQ62147 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms