Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Gm11425-201ENSMUST00000119608 498 ntBASIC13.92□□□□□ -0.18
Smarcd1Q61466 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.92□□□□□ -0.18
Smarcd1Q61466 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.92□□□□□ -0.18
Smarcd1Q61466 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Gm44069-201ENSMUST00000204898 506 ntBASIC13.92□□□□□ -0.18
Smarcd1Q61466 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Gm9396-201ENSMUST00000076703 567 ntBASIC13.92□□□□□ -0.18
Smarcd1Q61466 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.92□□□□□ -0.18
Smarcd1Q61466 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.92□□□□□ -0.18
Smarcd1Q61466 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.92□□□□□ -0.18
Smarcd1Q61466 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.91□□□□□ -0.18
Smarcd1Q61466 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Gm27331-201ENSMUST00000183705 60 ntBASIC13.91□□□□□ -0.18
Smarcd1Q61466 Gm37922-201ENSMUST00000195596 455 ntBASIC13.91□□□□□ -0.18
Smarcd1Q61466 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcd1Q61466 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.9□□□□□ -0.18
Smarcd1Q61466 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.9□□□□□ -0.18
Smarcd1Q61466 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.9□□□□□ -0.18
Smarcd1Q61466 Gm29705-201ENSMUST00000212598 474 ntBASIC13.9□□□□□ -0.18
Smarcd1Q61466 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.9□□□□□ -0.18
Smarcd1Q61466 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcd1Q61466 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.9□□□□□ -0.19
Smarcd1Q61466 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Smarcd1Q61466 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcd1Q61466 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms