Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccne1Q61457 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccne1Q61457 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccne1Q61457 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccne1Q61457 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccne1Q61457 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccne1Q61457 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.31■□□□□ 0.36
Ccne1Q61457 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccne1Q61457 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC17.3■□□□□ 0.36
Ccne1Q61457 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Gm17208-201ENSMUST00000168388 535 ntBASIC17.3■□□□□ 0.36
Ccne1Q61457 Gm27320-201ENSMUST00000184892 109 ntBASIC17.3■□□□□ 0.36
Ccne1Q61457 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC17.3■□□□□ 0.36
Ccne1Q61457 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccne1Q61457 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccne1Q61457 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccne1Q61457 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Gm14381-201ENSMUST00000122105 414 ntBASIC17.29■□□□□ 0.36
Ccne1Q61457 Gm13316-201ENSMUST00000140537 691 ntBASIC17.29■□□□□ 0.36
Ccne1Q61457 Gm8738-201ENSMUST00000172606 329 ntBASIC17.29■□□□□ 0.36
Ccne1Q61457 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccne1Q61457 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Gm21769-201ENSMUST00000211922 111 ntBASIC17.29■□□□□ 0.36
Ccne1Q61457 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccne1Q61457 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.29■□□□□ 0.36
Ccne1Q61457 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccne1Q61457 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Ccne1Q61457 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccne1Q61457 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccne1Q61457 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Mir3102-201ENSMUST00000175555 104 ntBASIC17.28■□□□□ 0.36
Ccne1Q61457 Gm6082-201ENSMUST00000215204 454 ntBASIC17.28■□□□□ 0.36
Ccne1Q61457 Morn2-202ENSMUST00000227729 656 ntBASIC17.28■□□□□ 0.36
Ccne1Q61457 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ccne1Q61457 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccne1Q61457 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Ccne1Q61457 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Ccne1Q61457 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.27■□□□□ 0.36
Ccne1Q61457 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ccne1Q61457 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccne1Q61457 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms