Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.88□□□□□ -0.35
Col12a1Q60847 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.88□□□□□ -0.35
Col12a1Q60847 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.88□□□□□ -0.35
Col12a1Q60847 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Snora73b-201ENSMUST00000083419 205 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Mir483-201ENSMUST00000093631 73 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Gm7541-201ENSMUST00000118361 535 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Gm6963-201ENSMUST00000147879 379 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Gm28324-201ENSMUST00000187913 264 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.88□□□□□ -0.35
Col12a1Q60847 Gm6722-201ENSMUST00000221586 390 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Gzmn-202ENSMUST00000225535 989 ntBASIC12.88□□□□□ -0.35
Col12a1Q60847 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col12a1Q60847 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.87□□□□□ -0.35
Col12a1Q60847 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Gm8492-201ENSMUST00000182375 987 ntBASIC12.87□□□□□ -0.35
Col12a1Q60847 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.87□□□□□ -0.35
Col12a1Q60847 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Gm14704-201ENSMUST00000120300 874 ntBASIC12.87□□□□□ -0.35
Col12a1Q60847 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.87□□□□□ -0.35
Col12a1Q60847 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.87□□□□□ -0.35
Col12a1Q60847 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.87□□□□□ -0.35
Col12a1Q60847 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col12a1Q60847 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Col12a1Q60847 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.86□□□□□ -0.35
Col12a1Q60847 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Gm11941-201ENSMUST00000119904 610 ntBASIC12.86□□□□□ -0.35
Col12a1Q60847 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.86□□□□□ -0.35
Col12a1Q60847 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col12a1Q60847 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Gm13600-201ENSMUST00000117949 744 ntBASIC12.86□□□□□ -0.35
Col12a1Q60847 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.86□□□□□ -0.35
Col12a1Q60847 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.86□□□□□ -0.35
Col12a1Q60847 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col12a1Q60847 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms