Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm9727-201ENSMUST00000161387 555 ntBASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Gm45612-201ENSMUST00000211320 160 ntBASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.4□□□□□ -0.74
Trav15-1-dv6-1Q5R1D2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.4□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trav15-1-dv6-1Q5R1D2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms