Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Gm9103-201ENSMUST00000119371 405 ntBASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Gm21362-201ENSMUST00000194272 928 ntBASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trav3-3Q5R1C3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gm8749-201ENSMUST00000117737 331 ntBASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gm7862-201ENSMUST00000121461 292 ntBASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.03□□□□□ -0.8
Trav3-3Q5R1C3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-3Q5R1C3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-3Q5R1C3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Trav3-3Q5R1C3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-3Q5R1C3 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-3Q5R1C3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav3-3Q5R1C3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.02□□□□□ -0.8
Trav3-3Q5R1C3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.02□□□□□ -0.8
Trav3-3Q5R1C3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav3-3Q5R1C3 Gm15173-201ENSMUST00000122049 433 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms