Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Mir3113-201ENSMUST00000175478 76 ntBASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cnga4Q3UW12 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Gm1401-201ENSMUST00000122048 772 ntBASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Gm9719-201ENSMUST00000162765 543 ntBASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.55□□□□□ -0.24
Cnga4Q3UW12 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.55□□□□□ -0.24
Cnga4Q3UW12 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.54□□□□□ -0.24
Cnga4Q3UW12 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Rprl2-201ENSMUST00000157150 290 ntBASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Gm8927-201ENSMUST00000181978 981 ntBASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cnga4Q3UW12 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms