Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhlrc4Q3UP44 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Nhlrc4Q3UP44 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Gm7287-201ENSMUST00000205267 602 ntBASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Gm8598-201ENSMUST00000221184 836 ntBASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhlrc4Q3UP44 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nhlrc4Q3UP44 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Gm13612-201ENSMUST00000119276 390 ntBASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nhlrc4Q3UP44 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc4Q3UP44 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms