Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Gm11524-201ENSMUST00000119349 807 ntBASIC12.61□□□□□ -0.39
Brf2Q3UAW9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Gm43094-201ENSMUST00000196549 921 ntBASIC12.61□□□□□ -0.39
Brf2Q3UAW9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Gm24447-201ENSMUST00000083977 338 ntBASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Brf2Q3UAW9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm15678-201ENSMUST00000117573 960 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm12403-201ENSMUST00000121384 959 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm19078-201ENSMUST00000206311 727 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Brf2Q3UAW9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms