Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm11597-201ENSMUST00000121423 964 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Col5a2Q3U962 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm44126-201ENSMUST00000204831 514 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Gm6458-201ENSMUST00000211573 635 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.65■□□□□ 0.1
Col5a2Q3U962 AC141438.2-201ENSMUST00000215068 271 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 AC135114.1-201ENSMUST00000228682 270 ntBASIC15.65■□□□□ 0.1
Col5a2Q3U962 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col5a2Q3U962 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.64■□□□□ 0.09
Col5a2Q3U962 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm12058-201ENSMUST00000118614 437 ntBASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm13045-201ENSMUST00000119019 712 ntBASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col5a2Q3U962 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.64■□□□□ 0.09
Col5a2Q3U962 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col5a2Q3U962 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.63■□□□□ 0.09
Col5a2Q3U962 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.63■□□□□ 0.09
Col5a2Q3U962 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.63■□□□□ 0.09
Col5a2Q3U962 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col5a2Q3U962 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.62■□□□□ 0.09
Col5a2Q3U962 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col5a2Q3U962 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.62■□□□□ 0.09
Col5a2Q3U962 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col5a2Q3U962 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms