Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.43□□□□□ -0.58
Fndc4Q3TR08 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Fndc4Q3TR08 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Fndc4Q3TR08 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Fndc4Q3TR08 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fndc4Q3TR08 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Fndc4Q3TR08 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.43□□□□□ -0.58
Fndc4Q3TR08 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fndc4Q3TR08 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Fndc4Q3TR08 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Gm15653-201ENSMUST00000119247 907 ntBASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fndc4Q3TR08 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.42□□□□□ -0.58
Fndc4Q3TR08 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gm27533-201ENSMUST00000183800 152 ntBASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Fndc4Q3TR08 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fndc4Q3TR08 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.4□□□□□ -0.58
Fndc4Q3TR08 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fndc4Q3TR08 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.4□□□□□ -0.58
Fndc4Q3TR08 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fndc4Q3TR08 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fndc4Q3TR08 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Fndc4Q3TR08 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms