Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Gm23251-201ENSMUST00000103773 110 ntBASIC18.52■□□□□ 0.55
Trpm1Q2TV84 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC18.52■□□□□ 0.55
Trpm1Q2TV84 Gm14058-201ENSMUST00000116082 735 ntBASIC18.52■□□□□ 0.55
Trpm1Q2TV84 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Trpm1Q2TV84 Mir7686-201ENSMUST00000200604 57 ntBASIC18.52■□□□□ 0.55
Trpm1Q2TV84 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC18.52■□□□□ 0.55
Trpm1Q2TV84 CT009713.8-201ENSMUST00000225448 560 ntBASIC18.52■□□□□ 0.55
Trpm1Q2TV84 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trpm1Q2TV84 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm29615-201ENSMUST00000185371 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm28224-201ENSMUST00000186078 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm29001-201ENSMUST00000186177 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm28292-201ENSMUST00000186593 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm28101-201ENSMUST00000187608 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm29076-201ENSMUST00000187689 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm28302-201ENSMUST00000187931 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm28646-201ENSMUST00000188220 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm28205-201ENSMUST00000189177 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm29032-201ENSMUST00000189797 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm28695-201ENSMUST00000190300 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm37448-201ENSMUST00000192795 697 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gm21027-201ENSMUST00000219300 1236 ntBASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trpm1Q2TV84 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Gm28882-201ENSMUST00000185504 314 ntBASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trpm1Q2TV84 Gm14150-201ENSMUST00000122404 1354 ntBASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Gm7851-201ENSMUST00000117574 323 ntBASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Gm37905-201ENSMUST00000195310 341 ntBASIC18.49■□□□□ 0.55
Trpm1Q2TV84 AC107638.1-201ENSMUST00000213690 1061 ntBASIC18.49■□□□□ 0.55
Trpm1Q2TV84 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trpm1Q2TV84 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms