Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm3329-201ENSMUST00000159873 556 ntBASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm4604-201ENSMUST00000025040 390 ntBASIC11.85□□□□□ -0.51
Chd8Q09XV5 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm12419-201ENSMUST00000116649 636 ntBASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm16202-201ENSMUST00000117532 544 ntBASIC11.85□□□□□ -0.51
Chd8Q09XV5 Gm12501-201ENSMUST00000119163 529 ntBASIC11.85□□□□□ -0.51
Chd8Q09XV5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.85□□□□□ -0.51
Chd8Q09XV5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd8Q09XV5 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm13875-201ENSMUST00000120162 282 ntBASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm1848-201ENSMUST00000120711 789 ntBASIC11.84□□□□□ -0.51
Chd8Q09XV5 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm27627-201ENSMUST00000183644 150 ntBASIC11.84□□□□□ -0.51
Chd8Q09XV5 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.84□□□□□ -0.51
Chd8Q09XV5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.84□□□□□ -0.51
Chd8Q09XV5 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.84□□□□□ -0.51
Chd8Q09XV5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd8Q09XV5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms