Protein–RNA interactions for Protein: Q08EE8

1700061G19Rik, RIKEN cDNA 1700061G19 gene, mousemouse

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700061G19RikQ08EE8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.51□□□□□ -0.25
1700061G19RikQ08EE8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Gm44855-201ENSMUST00000205725 362 ntBASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
1700061G19RikQ08EE8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
1700061G19RikQ08EE8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
1700061G19RikQ08EE8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
1700061G19RikQ08EE8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.48□□□□□ -0.25
1700061G19RikQ08EE8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
1700061G19RikQ08EE8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
1700061G19RikQ08EE8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
1700061G19RikQ08EE8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
1700061G19RikQ08EE8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms