Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.81□□□□□ -0.36
Hoxc4Q08624 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gm37042-201ENSMUST00000193816 581 ntBASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gm42627-201ENSMUST00000197347 224 ntBASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gm6007-201ENSMUST00000208170 823 ntBASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gm45880-201ENSMUST00000213041 853 ntBASIC12.81□□□□□ -0.36
Hoxc4Q08624 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.81□□□□□ -0.36
Hoxc4Q08624 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.81□□□□□ -0.36
Hoxc4Q08624 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxc4Q08624 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc4Q08624 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.8□□□□□ -0.36
Hoxc4Q08624 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.8□□□□□ -0.36
Hoxc4Q08624 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gm6458-201ENSMUST00000211573 635 ntBASIC12.8□□□□□ -0.36
Hoxc4Q08624 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gm7399-201ENSMUST00000032395 858 ntBASIC12.8□□□□□ -0.36
Hoxc4Q08624 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.8□□□□□ -0.36
Hoxc4Q08624 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc4Q08624 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc4Q08624 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms