Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Gm25927-201ENSMUST00000175058 117 ntBASIC14.47□□□□□ -0.09
Col9a2Q07643 Gm26927-201ENSMUST00000182385 965 ntBASIC14.47□□□□□ -0.09
Col9a2Q07643 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Gm38158-201ENSMUST00000194617 339 ntBASIC14.47□□□□□ -0.09
Col9a2Q07643 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Olfr582-201ENSMUST00000098212 960 ntBASIC14.47□□□□□ -0.09
Col9a2Q07643 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Col9a2Q07643 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col9a2Q07643 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Col9a2Q07643 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Col9a2Q07643 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Mir1247-201ENSMUST00000116706 82 ntBASIC14.46□□□□□ -0.09
Col9a2Q07643 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.46□□□□□ -0.09
Col9a2Q07643 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Col9a2Q07643 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.46□□□□□ -0.09
Col9a2Q07643 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.46□□□□□ -0.09
Col9a2Q07643 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col9a2Q07643 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a2Q07643 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a2Q07643 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a2Q07643 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.46□□□□□ -0.1
Col9a2Q07643 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.1
Col9a2Q07643 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a2Q07643 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a2Q07643 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col9a2Q07643 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col9a2Q07643 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Gm11591-201ENSMUST00000120063 702 ntBASIC14.45□□□□□ -0.1
Col9a2Q07643 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.45□□□□□ -0.1
Col9a2Q07643 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.45□□□□□ -0.1
Col9a2Q07643 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.45□□□□□ -0.1
Col9a2Q07643 Gm3786-201ENSMUST00000202659 378 ntBASIC14.45□□□□□ -0.1
Col9a2Q07643 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.45□□□□□ -0.1
Col9a2Q07643 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.45□□□□□ -0.1
Col9a2Q07643 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col9a2Q07643 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col9a2Q07643 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.45□□□□□ -0.1
Col9a2Q07643 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col9a2Q07643 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms