Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox4Q06831 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sox4Q06831 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sox4Q06831 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox4Q06831 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Gm5687-201ENSMUST00000118252 640 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 Gm13612-201ENSMUST00000119276 390 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox4Q06831 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox4Q06831 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.15□□□□□ -0.3
Sox4Q06831 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sox4Q06831 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox4Q06831 Gm17794-201ENSMUST00000220252 955 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.15□□□□□ -0.3
Sox4Q06831 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sox4Q06831 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox4Q06831 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sox4Q06831 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sox4Q06831 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sox4Q06831 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sox4Q06831 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.14□□□□□ -0.31
Sox4Q06831 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.14□□□□□ -0.31
Sox4Q06831 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Gm5186-201ENSMUST00000218781 920 ntBASIC13.14□□□□□ -0.31
Sox4Q06831 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.14□□□□□ -0.31
Sox4Q06831 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.14□□□□□ -0.31
Sox4Q06831 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.14□□□□□ -0.31
Sox4Q06831 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sox4Q06831 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.14□□□□□ -0.31
Sox4Q06831 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Sox4Q06831 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox4Q06831 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.13□□□□□ -0.31
Sox4Q06831 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.13□□□□□ -0.31
Sox4Q06831 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Sox4Q06831 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms