Protein–RNA interactions for Protein: Q04891

Sox13, Transcription factor SOX-13, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox13Q04891 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox13Q04891 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox13Q04891 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox13Q04891 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox13Q04891 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox13Q04891 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox13Q04891 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Sox13Q04891 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox13Q04891 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox13Q04891 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sox13Q04891 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.74□□□□□ -0.21
Sox13Q04891 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox13Q04891 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox13Q04891 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox13Q04891 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox13Q04891 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.74□□□□□ -0.21
Sox13Q04891 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.74□□□□□ -0.21
Sox13Q04891 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox13Q04891 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.74□□□□□ -0.21
Sox13Q04891 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox13Q04891 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox13Q04891 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Sox13Q04891 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox13Q04891 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Sox13Q04891 Matn2-203ENSMUST00000226766 3252 ntBASIC13.73□□□□□ -0.21
Sox13Q04891 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Sox13Q04891 Gm2810-201ENSMUST00000118681 990 ntBASIC13.73□□□□□ -0.21
Sox13Q04891 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox13Q04891 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.73□□□□□ -0.21
Sox13Q04891 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.73□□□□□ -0.21
Sox13Q04891 Mir5131-201ENSMUST00000175426 93 ntBASIC13.73□□□□□ -0.21
Sox13Q04891 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.73□□□□□ -0.21
Sox13Q04891 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox13Q04891 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox13Q04891 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox13Q04891 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Sox13Q04891 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Sox13Q04891 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Sox13Q04891 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox13Q04891 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.72□□□□□ -0.21
Sox13Q04891 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sox13Q04891 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.72□□□□□ -0.21
Sox13Q04891 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.72□□□□□ -0.21
Sox13Q04891 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.72□□□□□ -0.21
Sox13Q04891 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.72□□□□□ -0.21
Sox13Q04891 Mir8098-201ENSMUST00000184011 137 ntBASIC13.72□□□□□ -0.21
Sox13Q04891 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.72□□□□□ -0.21
Sox13Q04891 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.72□□□□□ -0.21
Sox13Q04891 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.72□□□□□ -0.21
Sox13Q04891 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sox13Q04891 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox13Q04891 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms