Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sox9Q04887 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox9Q04887 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox9Q04887 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm8738-201ENSMUST00000172606 329 ntBASIC13.79□□□□□ -0.2
Sox9Q04887 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox9Q04887 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.79□□□□□ -0.2
Sox9Q04887 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.79□□□□□ -0.2
Sox9Q04887 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.79□□□□□ -0.2
Sox9Q04887 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.79□□□□□ -0.2
Sox9Q04887 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox9Q04887 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Sox9Q04887 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox9Q04887 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox9Q04887 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.78□□□□□ -0.2
Sox9Q04887 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sox9Q04887 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Sox9Q04887 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.78□□□□□ -0.2
Sox9Q04887 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Sox9Q04887 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Sox9Q04887 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sox9Q04887 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sox9Q04887 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sox9Q04887 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sox9Q04887 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Sox9Q04887 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox9Q04887 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sox9Q04887 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox9Q04887 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox9Q04887 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Sox9Q04887 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox9Q04887 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sox9Q04887 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sox9Q04887 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox9Q04887 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox9Q04887 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Sox9Q04887 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.77□□□□□ -0.21
Sox9Q04887 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sox9Q04887 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.77□□□□□ -0.21
Sox9Q04887 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.77□□□□□ -0.21
Sox9Q04887 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sox9Q04887 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox9Q04887 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.77□□□□□ -0.21
Sox9Q04887 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.77□□□□□ -0.21
Sox9Q04887 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.77□□□□□ -0.21
Sox9Q04887 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
Sox9Q04887 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sox9Q04887 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms