Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.04□□□□□ -0.48
Shc1P98083 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.04□□□□□ -0.48
Shc1P98083 Gm6983-201ENSMUST00000214912 628 ntBASIC12.04□□□□□ -0.48
Shc1P98083 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Shc1P98083 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Shc1P98083 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Shc1P98083 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.04□□□□□ -0.48
Shc1P98083 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Shc1P98083 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Shc1P98083 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Shc1P98083 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.03□□□□□ -0.48
Shc1P98083 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shc1P98083 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.03□□□□□ -0.48
Shc1P98083 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.03□□□□□ -0.48
Shc1P98083 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.03□□□□□ -0.48
Shc1P98083 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.03□□□□□ -0.48
Shc1P98083 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.03□□□□□ -0.48
Shc1P98083 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.03□□□□□ -0.48
Shc1P98083 Gm8463-201ENSMUST00000208573 613 ntBASIC12.03□□□□□ -0.48
Shc1P98083 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shc1P98083 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.03□□□□□ -0.48
Shc1P98083 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.03□□□□□ -0.48
Shc1P98083 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Shc1P98083 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shc1P98083 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shc1P98083 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Shc1P98083 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.03□□□□□ -0.48
Shc1P98083 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shc1P98083 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shc1P98083 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.02□□□□□ -0.48
Shc1P98083 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shc1P98083 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shc1P98083 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shc1P98083 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shc1P98083 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.02□□□□□ -0.48
Shc1P98083 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
Shc1P98083 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shc1P98083 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shc1P98083 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.02□□□□□ -0.49
Shc1P98083 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.02□□□□□ -0.49
Shc1P98083 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.02□□□□□ -0.49
Shc1P98083 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.02□□□□□ -0.49
Shc1P98083 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Gm5745-201ENSMUST00000183748 313 ntBASIC12.02□□□□□ -0.49
Shc1P98083 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Shc1P98083 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shc1P98083 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Shc1P98083 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms