Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx3-2P97503 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.66□□□□□ -0.38
Nkx3-2P97503 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm18473-201ENSMUST00000220543 868 ntBASIC12.66□□□□□ -0.38
Nkx3-2P97503 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm10012-201ENSMUST00000078252 192 ntBASIC12.66□□□□□ -0.38
Nkx3-2P97503 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx3-2P97503 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gm4984-201ENSMUST00000115987 360 ntBASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gm13612-201ENSMUST00000119276 390 ntBASIC12.65□□□□□ -0.38
Nkx3-2P97503 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Mir7085-201ENSMUST00000184353 66 ntBASIC12.65□□□□□ -0.38
Nkx3-2P97503 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.65□□□□□ -0.38
Nkx3-2P97503 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.65□□□□□ -0.38
Nkx3-2P97503 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx3-2P97503 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Nkx3-2P97503 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx3-2P97503 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx3-2P97503 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx3-2P97503 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.64□□□□□ -0.39
Nkx3-2P97503 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx3-2P97503 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms