Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcc1P97496 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc1P97496 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc1P97496 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcc1P97496 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc1P97496 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc1P97496 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcc1P97496 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcc1P97496 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.68■□□□□ 0.26
Smarcc1P97496 Gm12012-201ENSMUST00000118857 1066 ntBASIC16.68■□□□□ 0.26
Smarcc1P97496 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcc1P97496 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Gm22902-201ENSMUST00000158488 302 ntBASIC16.68■□□□□ 0.26
Smarcc1P97496 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.68■□□□□ 0.26
Smarcc1P97496 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcc1P97496 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.68■□□□□ 0.26
Smarcc1P97496 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcc1P97496 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcc1P97496 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.68■□□□□ 0.26
Smarcc1P97496 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.68■□□□□ 0.26
Smarcc1P97496 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcc1P97496 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcc1P97496 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smarcc1P97496 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smarcc1P97496 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcc1P97496 Gm26956-201ENSMUST00000182176 986 ntBASIC16.67■□□□□ 0.26
Smarcc1P97496 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.67■□□□□ 0.26
Smarcc1P97496 Gm27341-201ENSMUST00000183570 106 ntBASIC16.67■□□□□ 0.26
Smarcc1P97496 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.67■□□□□ 0.26
Smarcc1P97496 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcc1P97496 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.67■□□□□ 0.26
Smarcc1P97496 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcc1P97496 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.66■□□□□ 0.26
Smarcc1P97496 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC16.66■□□□□ 0.26
Smarcc1P97496 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Gm17208-201ENSMUST00000168388 535 ntBASIC16.66■□□□□ 0.26
Smarcc1P97496 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Mir6979-201ENSMUST00000183927 56 ntBASIC16.66■□□□□ 0.26
Smarcc1P97496 Gm2260-201ENSMUST00000184965 657 ntBASIC16.66■□□□□ 0.26
Smarcc1P97496 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Gm31256-201ENSMUST00000194705 506 ntBASIC16.66■□□□□ 0.26
Smarcc1P97496 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.66■□□□□ 0.26
Smarcc1P97496 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Smarcc1P97496 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcc1P97496 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms