Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Gm44775-201ENSMUST00000207266 1456 ntBASIC16.68■□□□□ 0.26
Nkx2-3P97334 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.68■□□□□ 0.26
Nkx2-3P97334 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.68■□□□□ 0.26
Nkx2-3P97334 Gm30285-201ENSMUST00000214614 422 ntBASIC16.68■□□□□ 0.26
Nkx2-3P97334 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-3P97334 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.67■□□□□ 0.26
Nkx2-3P97334 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.67■□□□□ 0.26
Nkx2-3P97334 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.67■□□□□ 0.26
Nkx2-3P97334 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nkx2-3P97334 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.66■□□□□ 0.26
Nkx2-3P97334 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Gm19963-201ENSMUST00000208413 1255 ntBASIC16.66■□□□□ 0.26
Nkx2-3P97334 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nkx2-3P97334 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nkx2-3P97334 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms