Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC8.84□□□□□ -0.99
PrkdcP97313 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC8.84□□□□□ -0.99
PrkdcP97313 Gm15003-201ENSMUST00000118884 446 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC8.84□□□□□ -0.99
PrkdcP97313 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC8.84□□□□□ -0.99
PrkdcP97313 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC8.84□□□□□ -0.99
PrkdcP97313 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 Gm37458-201ENSMUST00000194055 410 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
PrkdcP97313 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PrkdcP97313 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
PrkdcP97313 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC8.84□□□□□ -0.99
PrkdcP97313 Gm4726-201ENSMUST00000135604 736 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 Gm6019-201ENSMUST00000148369 736 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 Gm18204-201ENSMUST00000209835 793 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 Gm45856-201ENSMUST00000212752 416 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC8.84□□□□□ -0.99
PrkdcP97313 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC8.84□□□□□ -0.99
PrkdcP97313 Gm43962-201ENSMUST00000203898 190 ntBASIC8.84□□□□□ -0.99
PrkdcP97313 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC8.84□□□□□ -0.99
PrkdcP97313 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
PrkdcP97313 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
PrkdcP97313 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC8.84□□□□□ -0.99
PrkdcP97313 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
PrkdcP97313 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
PrkdcP97313 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC8.83□□□□□ -1
PrkdcP97313 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC8.83□□□□□ -1
PrkdcP97313 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Gm15784-201ENSMUST00000120260 1462 ntBASIC8.83□□□□□ -1
PrkdcP97313 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PrkdcP97313 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC8.83□□□□□ -1
PrkdcP97313 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Ighv2-1-201ENSMUST00000170946 353 ntBASIC8.83□□□□□ -1
PrkdcP97313 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC8.83□□□□□ -1
PrkdcP97313 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC8.83□□□□□ -1
PrkdcP97313 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PrkdcP97313 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PrkdcP97313 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC8.83□□□□□ -1
PrkdcP97313 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC8.83□□□□□ -1
PrkdcP97313 Gm18059-201ENSMUST00000208073 580 ntBASIC8.83□□□□□ -1
PrkdcP97313 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC8.83□□□□□ -1
PrkdcP97313 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC8.83□□□□□ -1
PrkdcP97313 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
PrkdcP97313 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PrkdcP97313 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PrkdcP97313 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms