Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm8463-201ENSMUST00000208573 613 ntBASIC11.92□□□□□ -0.5
H3f3aP84244 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.92□□□□□ -0.5
H3f3aP84244 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
H3f3aP84244 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.92□□□□□ -0.5
H3f3aP84244 Gm26315-201ENSMUST00000083890 321 ntBASIC11.92□□□□□ -0.5
H3f3aP84244 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
H3f3aP84244 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
H3f3aP84244 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.92□□□□□ -0.5
H3f3aP84244 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.92□□□□□ -0.5
H3f3aP84244 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
H3f3aP84244 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.91□□□□□ -0.5
H3f3aP84244 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
H3f3aP84244 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
H3f3aP84244 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
H3f3aP84244 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.91□□□□□ -0.5
H3f3aP84244 Gm12490-201ENSMUST00000120255 560 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.91□□□□□ -0.5
H3f3aP84244 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.91□□□□□ -0.5
H3f3aP84244 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
H3f3aP84244 Gm7063-201ENSMUST00000186840 981 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
H3f3aP84244 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.91□□□□□ -0.5
H3f3aP84244 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.91□□□□□ -0.5
H3f3aP84244 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
H3f3aP84244 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.91□□□□□ -0.5
H3f3aP84244 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.9□□□□□ -0.5
H3f3aP84244 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.9□□□□□ -0.5
H3f3aP84244 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.9□□□□□ -0.5
H3f3aP84244 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.9□□□□□ -0.5
H3f3aP84244 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
H3f3aP84244 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
H3f3aP84244 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
H3f3aP84244 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.9□□□□□ -0.5
H3f3aP84244 Gm11918-201ENSMUST00000121660 179 ntBASIC11.9□□□□□ -0.5
H3f3aP84244 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.9□□□□□ -0.5
H3f3aP84244 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.9□□□□□ -0.5
H3f3aP84244 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H3f3aP84244 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms