Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Shox2P70390 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Shox2P70390 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.21□□□□□ -0.3
Shox2P70390 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shox2P70390 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.2□□□□□ -0.3
Shox2P70390 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Shox2P70390 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Shox2P70390 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Gm27459-201ENSMUST00000184860 107 ntBASIC13.2□□□□□ -0.3
Shox2P70390 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.2□□□□□ -0.3
Shox2P70390 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Birc2-201ENSMUST00000054878 378 ntBASIC13.2□□□□□ -0.3
Shox2P70390 Mir125a-201ENSMUST00000083545 68 ntBASIC13.2□□□□□ -0.3
Shox2P70390 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.2□□□□□ -0.3
Shox2P70390 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Shox2P70390 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shox2P70390 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.19□□□□□ -0.3
Shox2P70390 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.19□□□□□ -0.3
Shox2P70390 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.19□□□□□ -0.3
Shox2P70390 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Gm17968-201ENSMUST00000194902 784 ntBASIC13.19□□□□□ -0.3
Shox2P70390 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Gm34391-201ENSMUST00000203706 907 ntBASIC13.19□□□□□ -0.3
Shox2P70390 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Gm10060-201ENSMUST00000212002 111 ntBASIC13.19□□□□□ -0.3
Shox2P70390 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.19□□□□□ -0.3
Shox2P70390 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shox2P70390 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shox2P70390 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Shox2P70390 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Shox2P70390 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.18□□□□□ -0.3
Shox2P70390 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.18□□□□□ -0.3
Shox2P70390 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.18□□□□□ -0.3
Shox2P70390 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.18□□□□□ -0.3
Shox2P70390 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shox2P70390 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms