Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smad1P70340 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smad1P70340 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Smad1P70340 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smad1P70340 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smad1P70340 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smad1P70340 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smad1P70340 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.82□□□□□ -0.2
Smad1P70340 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smad1P70340 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smad1P70340 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smad1P70340 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
Smad1P70340 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.81□□□□□ -0.2
Smad1P70340 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.81□□□□□ -0.2
Smad1P70340 Gm28760-201ENSMUST00000185995 736 ntBASIC13.81□□□□□ -0.2
Smad1P70340 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.81□□□□□ -0.2
Smad1P70340 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Gm9797-201ENSMUST00000052902 613 ntBASIC13.81□□□□□ -0.2
Smad1P70340 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Smad1P70340 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smad1P70340 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Smad1P70340 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.81□□□□□ -0.2
Smad1P70340 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.8□□□□□ -0.2
Smad1P70340 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.8□□□□□ -0.2
Smad1P70340 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smad1P70340 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.8□□□□□ -0.2
Smad1P70340 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Smad1P70340 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Smad1P70340 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.8□□□□□ -0.2
Smad1P70340 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.8□□□□□ -0.2
Smad1P70340 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.8□□□□□ -0.2
Smad1P70340 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smad1P70340 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.8□□□□□ -0.2
Smad1P70340 Gm10766-202ENSMUST00000194123 606 ntBASIC13.8□□□□□ -0.2
Smad1P70340 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.8□□□□□ -0.2
Smad1P70340 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Gm6007-201ENSMUST00000208170 823 ntBASIC13.8□□□□□ -0.2
Smad1P70340 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.8□□□□□ -0.2
Smad1P70340 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.8□□□□□ -0.2
Smad1P70340 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Smad1P70340 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Smad1P70340 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Smad1P70340 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Smad1P70340 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smad1P70340 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Smad1P70340 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms