Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Stra8P70278 Gm14767-201ENSMUST00000121559 586 ntBASIC18.5■□□□□ 0.55
Stra8P70278 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Stra8P70278 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC18.5■□□□□ 0.55
Stra8P70278 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.5■□□□□ 0.55
Stra8P70278 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Gm27194-201ENSMUST00000175753 2936 ntBASIC18.5■□□□□ 0.55
Stra8P70278 Ntrk2-204ENSMUST00000224259 3049 ntBASIC18.5■□□□□ 0.55
Stra8P70278 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Stra8P70278 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Stra8P70278 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Stra8P70278 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Stra8P70278 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC18.49■□□□□ 0.55
Stra8P70278 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.49■□□□□ 0.55
Stra8P70278 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.49■□□□□ 0.55
Stra8P70278 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Stra8P70278 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Stra8P70278 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Stra8P70278 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Stra8P70278 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Gm43423-201ENSMUST00000198390 2094 ntBASIC18.48■□□□□ 0.55
Stra8P70278 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC18.48■□□□□ 0.55
Stra8P70278 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Gm15653-201ENSMUST00000119247 907 ntBASIC18.48■□□□□ 0.55
Stra8P70278 Cd63-ps-201ENSMUST00000145417 875 ntBASIC18.48■□□□□ 0.55
Stra8P70278 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.48■□□□□ 0.55
Stra8P70278 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Stra8P70278 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Stra8P70278 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Stra8P70278 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Stra8P70278 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Stra8P70278 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.47■□□□□ 0.55
Stra8P70278 Gm33320-201ENSMUST00000192232 530 ntBASIC18.47■□□□□ 0.55
Stra8P70278 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC18.47■□□□□ 0.55
Stra8P70278 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.47■□□□□ 0.55
Stra8P70278 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Stra8P70278 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Stra8P70278 AC139350.1-201ENSMUST00000227064 1594 ntBASIC18.47■□□□□ 0.55
Stra8P70278 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Stra8P70278 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stra8P70278 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Stra8P70278 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Stra8P70278 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Stra8P70278 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stra8P70278 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Stra8P70278 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Stra8P70278 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Stra8P70278 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms