Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Six5P70178 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Six5P70178 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Six5P70178 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Six5P70178 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.53□□□□□ -0.4
Six5P70178 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Six5P70178 Mir874-201ENSMUST00000104769 76 ntBASIC12.53□□□□□ -0.4
Six5P70178 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Six5P70178 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Six5P70178 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.53□□□□□ -0.4
Six5P70178 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Gm18018-201ENSMUST00000198273 408 ntBASIC12.53□□□□□ -0.4
Six5P70178 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.53□□□□□ -0.4
Six5P70178 Gm6983-201ENSMUST00000214912 628 ntBASIC12.53□□□□□ -0.4
Six5P70178 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.53□□□□□ -0.4
Six5P70178 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.53□□□□□ -0.4
Six5P70178 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.53□□□□□ -0.4
Six5P70178 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Six5P70178 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Six5P70178 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.53□□□□□ -0.4
Six5P70178 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six5P70178 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six5P70178 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six5P70178 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.52□□□□□ -0.4
Six5P70178 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six5P70178 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six5P70178 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six5P70178 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Six5P70178 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.52□□□□□ -0.41
Six5P70178 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Matn2-206ENSMUST00000228570 2798 ntBASIC12.52□□□□□ -0.41
Six5P70178 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.52□□□□□ -0.41
Six5P70178 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.52□□□□□ -0.41
Six5P70178 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.52□□□□□ -0.41
Six5P70178 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Six5P70178 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.52□□□□□ -0.41
Six5P70178 Gm44397-201ENSMUST00000195950 113 ntBASIC12.52□□□□□ -0.41
Six5P70178 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.52□□□□□ -0.41
Six5P70178 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.52□□□□□ -0.41
Six5P70178 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Six5P70178 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Six5P70178 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Six5P70178 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Six5P70178 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Six5P70178 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Six5P70178 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six5P70178 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six5P70178 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six5P70178 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six5P70178 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six5P70178 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six5P70178 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Six5P70178 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms