Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vamp3P63024 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vamp3P63024 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.16□□□□□ -0.78
Vamp3P63024 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Vamp3P63024 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.16□□□□□ -0.78
Vamp3P63024 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.15□□□□□ -0.78
Vamp3P63024 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.15□□□□□ -0.78
Vamp3P63024 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.15□□□□□ -0.78
Vamp3P63024 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.15□□□□□ -0.78
Vamp3P63024 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Vamp3P63024 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.15□□□□□ -0.78
Vamp3P63024 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.15□□□□□ -0.78
Vamp3P63024 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.15□□□□□ -0.78
Vamp3P63024 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Vamp3P63024 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Vamp3P63024 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vamp3P63024 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Vamp3P63024 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vamp3P63024 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vamp3P63024 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vamp3P63024 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Vamp3P63024 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.15□□□□□ -0.79
Vamp3P63024 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vamp3P63024 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vamp3P63024 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Vamp3P63024 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Vamp3P63024 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Vamp3P63024 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Vamp3P63024 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.14□□□□□ -0.79
Vamp3P63024 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.14□□□□□ -0.79
Vamp3P63024 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Vamp3P63024 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.14□□□□□ -0.79
Vamp3P63024 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.14□□□□□ -0.79
Vamp3P63024 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Vamp3P63024 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Vamp3P63024 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Daam2-202ENSMUST00000224595 1926 ntBASIC10.14□□□□□ -0.79
Vamp3P63024 Mir874-201ENSMUST00000104769 76 ntBASIC10.14□□□□□ -0.79
Vamp3P63024 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.14□□□□□ -0.79
Vamp3P63024 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Vamp3P63024 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.14□□□□□ -0.79
Vamp3P63024 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC10.14□□□□□ -0.79
Vamp3P63024 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.14□□□□□ -0.79
Vamp3P63024 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.14□□□□□ -0.79
Vamp3P63024 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vamp3P63024 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.14□□□□□ -0.79
Vamp3P63024 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms