Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ybx1P62960 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ybx1P62960 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Ybx1P62960 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.69□□□□□ -0.22
Ybx1P62960 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Gm18827-201ENSMUST00000188341 790 ntBASIC13.69□□□□□ -0.22
Ybx1P62960 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.69□□□□□ -0.22
Ybx1P62960 Gm38158-201ENSMUST00000194617 339 ntBASIC13.69□□□□□ -0.22
Ybx1P62960 Gm38341-201ENSMUST00000195357 515 ntBASIC13.69□□□□□ -0.22
Ybx1P62960 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Gm9368-201ENSMUST00000219348 831 ntBASIC13.69□□□□□ -0.22
Ybx1P62960 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.69□□□□□ -0.22
Ybx1P62960 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.69□□□□□ -0.22
Ybx1P62960 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ybx1P62960 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.69□□□□□ -0.22
Ybx1P62960 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ybx1P62960 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ybx1P62960 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.68□□□□□ -0.22
Ybx1P62960 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.68□□□□□ -0.22
Ybx1P62960 Gm44364-201ENSMUST00000198368 141 ntBASIC13.68□□□□□ -0.22
Ybx1P62960 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Gm10608-202ENSMUST00000213924 676 ntBASIC13.68□□□□□ -0.22
Ybx1P62960 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ybx1P62960 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Gm16372-201ENSMUST00000073088 450 ntBASIC13.68□□□□□ -0.22
Ybx1P62960 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ybx1P62960 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ybx1P62960 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.68□□□□□ -0.22
Ybx1P62960 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.68□□□□□ -0.22
Ybx1P62960 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ybx1P62960 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ybx1P62960 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.67□□□□□ -0.22
Ybx1P62960 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.67□□□□□ -0.22
Ybx1P62960 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.67□□□□□ -0.22
Ybx1P62960 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ybx1P62960 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ybx1P62960 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Gm15236-201ENSMUST00000117309 379 ntBASIC13.67□□□□□ -0.22
Ybx1P62960 Gm6447-201ENSMUST00000118905 835 ntBASIC13.67□□□□□ -0.22
Ybx1P62960 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ybx1P62960 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.67□□□□□ -0.22
Ybx1P62960 Gm29396-201ENSMUST00000185659 716 ntBASIC13.67□□□□□ -0.22
Ybx1P62960 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.67□□□□□ -0.22
Ybx1P62960 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.67□□□□□ -0.22
Ybx1P62960 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.67□□□□□ -0.22
Ybx1P62960 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ybx1P62960 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.67□□□□□ -0.22
Ybx1P62960 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.67□□□□□ -0.22
Ybx1P62960 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ybx1P62960 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ybx1P62960 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ybx1P62960 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ybx1P62960 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms