Protein–RNA interactions for Protein: P62838

Ube2d2, Ubiquitin-conjugating enzyme E2 D2, mousemouse

Predictions only

Length 147 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d2P62838 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube2d2P62838 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.61□□□□□ -0.87
Ube2d2P62838 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ube2d2P62838 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ube2d2P62838 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube2d2P62838 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ube2d2P62838 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.6□□□□□ -0.87
Ube2d2P62838 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Ube2d2P62838 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.6□□□□□ -0.87
Ube2d2P62838 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.6□□□□□ -0.87
Ube2d2P62838 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Ube2d2P62838 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Ube2d2P62838 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.59□□□□□ -0.87
Ube2d2P62838 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Gm13385-201ENSMUST00000121089 220 ntBASIC9.59□□□□□ -0.87
Ube2d2P62838 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.59□□□□□ -0.87
Ube2d2P62838 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Gm27430-201ENSMUST00000184585 107 ntBASIC9.59□□□□□ -0.87
Ube2d2P62838 Gm44333-201ENSMUST00000197168 107 ntBASIC9.59□□□□□ -0.87
Ube2d2P62838 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 AC132104.2-201ENSMUST00000215011 266 ntBASIC9.59□□□□□ -0.87
Ube2d2P62838 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Gm8396-201ENSMUST00000057361 823 ntBASIC9.59□□□□□ -0.87
Ube2d2P62838 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Ube2d2P62838 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ube2d2P62838 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms