Protein–RNA interactions for Protein: P61961

Ufm1, Ubiquitin-fold modifier 1, mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufm1P61961 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ufm1P61961 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.84□□□□□ -0.35
Ufm1P61961 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ufm1P61961 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.84□□□□□ -0.35
Ufm1P61961 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ufm1P61961 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.84□□□□□ -0.35
Ufm1P61961 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.83□□□□□ -0.35
Ufm1P61961 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.83□□□□□ -0.35
Ufm1P61961 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ufm1P61961 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ufm1P61961 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ufm1P61961 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ufm1P61961 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.83□□□□□ -0.35
Ufm1P61961 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.83□□□□□ -0.36
Ufm1P61961 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Ufm1P61961 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.83□□□□□ -0.36
Ufm1P61961 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.83□□□□□ -0.36
Ufm1P61961 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ufm1P61961 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.83□□□□□ -0.36
Ufm1P61961 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Gm27321-201ENSMUST00000185021 205 ntBASIC12.83□□□□□ -0.36
Ufm1P61961 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.83□□□□□ -0.36
Ufm1P61961 Gm2756-201ENSMUST00000195851 400 ntBASIC12.83□□□□□ -0.36
Ufm1P61961 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Gm6888-201ENSMUST00000221983 706 ntBASIC12.83□□□□□ -0.36
Ufm1P61961 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.83□□□□□ -0.36
Ufm1P61961 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.83□□□□□ -0.36
Ufm1P61961 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Ufm1P61961 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.83□□□□□ -0.36
Ufm1P61961 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ufm1P61961 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.83□□□□□ -0.36
Ufm1P61961 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.83□□□□□ -0.36
Ufm1P61961 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ufm1P61961 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ufm1P61961 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ufm1P61961 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.82□□□□□ -0.36
Ufm1P61961 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ufm1P61961 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.82□□□□□ -0.36
Ufm1P61961 Mir874-201ENSMUST00000104769 76 ntBASIC12.82□□□□□ -0.36
Ufm1P61961 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Ufm1P61961 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.82□□□□□ -0.36
Ufm1P61961 Gm2213-201ENSMUST00000197485 688 ntBASIC12.82□□□□□ -0.36
Ufm1P61961 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Gm8396-201ENSMUST00000057361 823 ntBASIC12.82□□□□□ -0.36
Ufm1P61961 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ufm1P61961 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ufm1P61961 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms