Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.89□□□□□ -0.51
Sf3b6P59708 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sf3b6P59708 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.88□□□□□ -0.51
Sf3b6P59708 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.88□□□□□ -0.51
Sf3b6P59708 Gm9824-201ENSMUST00000178707 561 ntBASIC11.88□□□□□ -0.51
Sf3b6P59708 Gm27430-201ENSMUST00000184585 107 ntBASIC11.88□□□□□ -0.51
Sf3b6P59708 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Gm44333-201ENSMUST00000197168 107 ntBASIC11.88□□□□□ -0.51
Sf3b6P59708 Gm7774-201ENSMUST00000200064 533 ntBASIC11.88□□□□□ -0.51
Sf3b6P59708 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.88□□□□□ -0.51
Sf3b6P59708 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.88□□□□□ -0.51
Sf3b6P59708 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Sf3b6P59708 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sf3b6P59708 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Sf3b6P59708 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm22065-201ENSMUST00000103753 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm22066-201ENSMUST00000103761 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm24932-201ENSMUST00000103763 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm24115-201ENSMUST00000103799 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm22190-201ENSMUST00000103827 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm22191-201ENSMUST00000103831 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm24721-201ENSMUST00000103849 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm28018-201ENSMUST00000103869 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm26399-201ENSMUST00000103937 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm15920-201ENSMUST00000118998 402 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm25349-201ENSMUST00000177728 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm23616-201ENSMUST00000177797 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm25871-201ENSMUST00000177816 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm24752-201ENSMUST00000178240 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm24496-201ENSMUST00000178287 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm25649-201ENSMUST00000178476 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm25548-201ENSMUST00000178681 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm23147-201ENSMUST00000178841 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm26095-201ENSMUST00000179270 110 ntBASIC11.87□□□□□ -0.51
Sf3b6P59708 Gm22171-201ENSMUST00000179283 110 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms