Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC17.91■□□□□ 0.46
Nphp4P59240 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Nphp4P59240 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.91■□□□□ 0.46
Nphp4P59240 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 Gm37827-201ENSMUST00000194486 1542 ntBASIC17.91■□□□□ 0.46
Nphp4P59240 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Nphp4P59240 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.91■□□□□ 0.46
Nphp4P59240 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Nphp4P59240 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Gm15236-201ENSMUST00000117309 379 ntBASIC17.9■□□□□ 0.46
Nphp4P59240 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.9■□□□□ 0.46
Nphp4P59240 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC17.9■□□□□ 0.46
Nphp4P59240 Gm17376-201ENSMUST00000166016 84 ntBASIC17.9■□□□□ 0.46
Nphp4P59240 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Nphp4P59240 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC17.9■□□□□ 0.46
Nphp4P59240 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.9■□□□□ 0.46
Nphp4P59240 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.9■□□□□ 0.46
Nphp4P59240 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Nphp4P59240 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nphp4P59240 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC17.9■□□□□ 0.46
Nphp4P59240 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.9■□□□□ 0.46
Nphp4P59240 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Nphp4P59240 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Nphp4P59240 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nphp4P59240 Gm13875-201ENSMUST00000120162 282 ntBASIC17.89■□□□□ 0.46
Nphp4P59240 Gm14381-201ENSMUST00000122105 414 ntBASIC17.89■□□□□ 0.46
Nphp4P59240 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.89■□□□□ 0.46
Nphp4P59240 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.89■□□□□ 0.46
Nphp4P59240 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nphp4P59240 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Nphp4P59240 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC17.89■□□□□ 0.46
Nphp4P59240 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.89■□□□□ 0.46
Nphp4P59240 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nphp4P59240 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nphp4P59240 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.89■□□□□ 0.46
Nphp4P59240 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Nphp4P59240 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm44094-201ENSMUST00000204703 2030 ntBASIC17.89■□□□□ 0.45
Nphp4P59240 Daam2-202ENSMUST00000224595 1926 ntBASIC17.89■□□□□ 0.45
Nphp4P59240 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Nphp4P59240 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nphp4P59240 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.89■□□□□ 0.45
Nphp4P59240 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm8908-201ENSMUST00000121633 1024 ntBASIC17.89■□□□□ 0.45
Nphp4P59240 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm20482-202ENSMUST00000174729 825 ntBASIC17.89■□□□□ 0.45
Nphp4P59240 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.89■□□□□ 0.45
Nphp4P59240 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm30285-201ENSMUST00000214614 422 ntBASIC17.89■□□□□ 0.45
Nphp4P59240 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC17.89■□□□□ 0.45
Nphp4P59240 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Nphp4P59240 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Nphp4P59240 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.89■□□□□ 0.45
Nphp4P59240 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nphp4P59240 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Nphp4P59240 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nphp4P59240 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nphp4P59240 Gm3287-205ENSMUST00000228893 1332 ntBASIC17.88■□□□□ 0.45
Nphp4P59240 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Nphp4P59240 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nphp4P59240 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms